Introduction to Metagenomics

Materials designed for class Sp24-IDGH-1001-1-Bioinformatics Feb 2024.

Content developed by TTS Research Technology

• Shirley Li, PhD, Bioinformatician, xue.li37@tufts.edu

Prerequisites

• Access to Galaxy

Contents

• Hands-on exercise

  • Exercise 1: NCBI Database Navigation

  • Exercise 2: NCBI Database Exploration

  • Exercise 3: Taxonomy assignment and interpretation with Kraken2

  • Exercise 4: Taxonomy visualization

• Slides for this lecture is here

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