Blast Databases#
NCBI nt Blast database#
Last updated date: 12/12/2024
Directory at HPC:
/cluster/tufts/biocontainers/datasets/blast/latest/nt
NCBI nr Blast database#
Last updated date: 12/12/2024
Directory at HPC:
/cluster/tufts/biocontainers/datasets/blast/latest/nr
NCBI refseq_protein Blast database#
Last updated date: 12/12/2024
Directory at HPC:
/cluster/tufts/biocontainers/datasets/blast/latest/refseq_protein
NCBI refseq_rna Blast database#
Last updated date: 12/12/2024
Directory at HPC:
/cluster/tufts/biocontainers/datasets/blast/latest/refseq_rna
Swiss-prot sequence databases#
Last updated date: 12/12/2024
Directory at HPC:
/cluster/tufts/biocontainers/datasets/blast/latest/swissprot
NCBI env_nt database: nucleotide sequences for metagenome#
Last updated date: 12/12/2024
Directory at HPC:
/cluster/tufts/biocontainers/datasets/blast/latest/env_nt
NCBI tsa_nt database: sequences from the TSA division of GenBank, EMBL, and DDBJ#
Last updated date: 12/12/2024
Directory at HPC:
/cluster/tufts/biocontainers/datasets/blast/latest/tsa_nt
NCBI pataa: patent protein sequences from USPTO or EPO/JPO via EMBL/DDBJ#
Last updated date: 12/12/2024
Directory at HPC:
/cluster/tufts/biocontainers/datasets/blast/latest/pataa
NCBI patnt: patent nucleotide sequences from USPTO or EPO/JPO via EMBL/DDBJ#
Last updated date: 12/12/2024
Directory at HPC:
/cluster/tufts/biocontainers/datasets/blast/latest/patnt