Metaphlan

MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level.

• Home page: biobakery/MetaPhlAn

Metaphlan has strict requirements for database. Each metaphlan version also requires specific version of database.

metaphlan/4.0.6

For metaphlan module metaphlan/4.0.6,

• Version: mpa_vJun23_CHOCOPhlAnSGB_202307

• Directory at HPC: /cluster/tufts/biocontainers/datasets/metaphlan/202307

metaphlan/4.1.1

For metaphlan module metaphlan/4.1.1,

• Version: mpa_vJun23_CHOCOPhlAnSGB_202403

• Directory at HPC: /cluster/tufts/biocontainers/datasets/metaphlan/202403