geNomad: identification of mobile genetic elements#
geNomad’s primary goal is to identify viruses and plasmids in sequencing data (isolates, metagenomes, and metatranscriptomes). It also provides a couple of additional features that can help you in your analysis:
Taxonomic assignment of viral genomes.
Identification of viruses integrated in host genomes (proviruses).
Functional annotation of proteins.
More information: apcamargo/genomad
Database#
v1.7#
Downloaded date: Dec.11, 2024
Directory at HPC:
/cluster/tufts/biocontainers/datasets/genomad_db/v1.7/